Best Billing and Invoicing Software for Shopify

Find and compare the best Billing and Invoicing software for Shopify in 2025

Use the comparison tool below to compare the top Billing and Invoicing software for Shopify on the market. You can filter results by user reviews, pricing, features, platform, region, support options, integrations, and more.

  • 1
    Xero Reviews
    Top Pick

    Xero

    Xero

    $2.90/month
    4,637 Ratings
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    Save 90% for 6 months on Xero's award-winning accounting and online bookkeeping platform. Beautifully simple, Xero offers a wide range of features that help businesses manage their numbers effortlessly, including invoicing, inventory management, bank connections, payroll, reporting, and app integrations for a seamless user experience. Xero offers plans for businesses of any size, with room to grow. Xero provides a comprehensive ecosystem of integrated apps and connections to banks and financial institutions, allowing small businesses to access a variety of solutions within its open platform to efficiently manage their operations and finances. For accounting and bookkeeping practices, Xero offers powerful compliance tools, intelligent practice management software, and a centralized cloud-based accounting ledger for all clients, accessible in one place. Xero automates data entry by pulling sales and expense records directly from banks, invoicing apps, point-of-sale systems, and more. It securely connects to business bank accounts, eliminating manual data input, while smart bank reconciliation learns user preferences to streamline the process.
  • 2
    Mollie Reviews

    Mollie

    Mollie

    €0.25 per transaction
    9,968 Ratings
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    Mollie is a money management platform that powers growth for over 250,000 businesses – from startups to enterprises. It's a single platform to get paid and simplify your finances, with online and in-person payments, subscriptions, financing, reconciliation, invoicing and fraud prevention tools. Here's how Mollie can help your business: – Accept online and in-person payments and manage everything on one platform. – Increase conversion with 35+ payment methods, including global leaders and local favourites. – Boost revenue and build trust with an optimised checkout flow built to convert. – Use an all-in-one dashboard to manage payments, get insights, access funding, and streamline accounting. – Get paid faster by sending payment requests and branded invoices in just a few clicks. – Access fast, flexible business funding up to 350k with transparent pricing and flexible repayments. Get started today with transparent pricing, no hidden fees, and no lock-in contract.
  • 3
    Stripe Reviews
    Top Pick

    Stripe

    Stripe

    2.9% + 30¢ per charge
    3,578 Ratings
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    The new standard for online payments. Stripe is the best platform to run an internet business. For forward-thinking businesses all over the globe, we handle billions of dollars annually. Stripe creates the most flexible and powerful tools for internet commerce. Whether you’re creating a subscription service, an on-demand marketplace, an e-commerce store, or a crowdfunding platform, Stripe’s meticulously designed APIs and unmatched functionality help you create the best possible product for your users. Stripe is helping millions of innovative technology companies scale faster and more efficiently than ever before. We believe that payments is a problem rooted in code and not finance. We are obsessed with finding elegant, modular abstractions that allow for robust, scalable and flexible integrations. Stripe is easy to use because we remove unnecessary complexity and extraneous detail.
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    Odoo Reviews
    Top Pick

    Odoo

    Odoo

    $25.00/month/user
    1,525 Ratings
    Odoo is an open-source, fully customizable and extensible software that includes hundreds of professionally designed business applications. Odoo's intuitive database can meet most business needs including CRM, Sales, Projects, Manufacturing, Inventory, Accounting, and Accounting. Odoo is a software solution that can be used to meet all company needs, regardless of size or budget. Odoo's seamless design makes it easy for businesses to become more efficient and save time. Each module is interconnected to offer a seamless experience from one app to the next. Users can automate many tasks that would otherwise require manual inputs to multiple applications. Odoo enables teams to collaborate with each other from one platform, allowing them to keep all business functions in one place.
  • 5
    EBizCharge Reviews
    Top Pick
    EBizCharge is the leader in integrated payment solutions that helps businesses facilitate electronic payment processing, enhance transaction security, and increase client profits. Providing businesses with the tools they need to make transactions faster, safer, and less expensive while offering a premium payment processing experience. EBizCharge applications are PCI-compliant and fully integrated with major ERP/accounting systems, including QuickBooks, Sage ERP products, SAP Business One, Microsoft Dynamics, NetSuite, Epicor, Acumatica, and major online shopping carts, including Magento, WooCommerce, and Volusion.
  • 6
    Avaza Reviews
    Top Pick

    Avaza

    Avaza Software

    $11.95/month
    28 Ratings
    Avaza allows you to manage projects, track time, expenses, send invoices, and receive online payments. Avaza is a one-stop solution for project management, time tracking and invoicing. It allows companies to focus on clients. This platform is ideal for consultants, freelancers, and small businesses. It is accessible anywhere, on any device.
  • 7
    Chargebee Reviews
    Chargebee is a subscription management and recurring billing tool that helps SaaS businesses streamline Revenue Operations. Chargebee integrates seamlessly with leading payment gateways such as PayPal, Braintree and Stripe. All over the globe, Chargebee allows you to automate recurring payments collection, invoicing, taxes and email notifications. Chargebee manages all your critical workflows, from lead to ledger, with powerful integrations that include Salesforce and Quickbooks, Avalara and Slack. Chargebee Retention is the best-of-breed solution that helps you avoid cancellations on a scale that suits your needs. It offers personalized experiences that deliver results and provides a way to deflect cancellations. To ensure a relevant and personalized cancel experience, you can run experiments based upon customer and subscription attributes.
  • 8
    Invoice2go Reviews
    Invoice2go, a mobile-first, intuitive Invoicing Manager, aims to make small businesses more profitable. Users can quickly submit estimates and invoices to clients and potential clients using powerful features such as Expense Tracking and Pre-set Invoice templates. Any send document can be accessed by receiving users via a web-based device or mobile device. They can view, accept, and submit payment. It's that simple.
  • 9
    Fiverr Workspace Reviews
    Fiverr Workspace, previously AND.CO, is a comprehensive business management tool for freelancers and entrepreneurs. This platform offers essential features like automated invoicing, contract creation, task management, and time tracking, all designed to reduce the time spent on administrative duties. It integrates both Fiverr and external projects into a single dashboard, helping users monitor their finances, track expenses, and prepare for tax season. The service is aimed at simplifying business processes so that users can focus more on their core work.
  • 10
    SAP Business ByDesign Reviews

    SAP Business ByDesign

    Navigator Business Solutions

    $22 per/user/month
    1 Rating
    SAP Business ByDesign is an affordable, easy-to-use enterprise resource planning system (ERP) specifically designed for fast-growing small to mid-market businesses and subsidiaries of larger companies. From financials and inventory to customer relationship management and human resources, SAP Business ByDesign integrates all major aspects of your business for end-to-end visibility, added efficiency, and improved operational control. By serving as the nerve-center for your business, with all data flowing into a single, centralized system, SAP Business ByDesign enables real-time data access for faster, complete, more nimble decision-making. SAP Business ByDesign comes with workflows and best practices that help your business run operations more efficiently from Day 1. It also scales with your business, so you don’t have to change systems as you grow. Some of the key features of SAP Business ByDesign: Integrated system architecture that manages all your company dataSAP Business ByDesign Complete operational visibility and control End-to-end business process automation Precise real-time reporting and analytics Customization for business and industry-specific requirements Secure data access anytime, anywhere
  • 11
    Stripe Billing Reviews
    Stripe Billing allows you to quickly bill customers with invoices or subscriptions. You can increase revenue, support new products and business models, as well as accept recurring payments worldwide. Instantly start collecting one-time and recurring payments via card, bank transfer, or other payment methods. You can test and roll out changes using our API or directly in the Dashboard. Flexible billing logic is available for everything, from per-seat pricing to metered billing right out of the box. There is support for coupons, free trials and add-ons. Smart retries, automatic failed payment emails, and an automated card updater reduce churn. Stripe Billing helped businesses recover an average of 38% of failed payments in 2021. Automated reporting and revenue recognition help you understand your financial health, churn, growth, and financial health. Easily sync billing data and payments data with all of your workflows.
  • 12
    Synder Reviews
    Top Pick

    Synder

    Synder

    $39.99 per month
    21 Ratings
    Synder is an accounting software that small businesses can use. It offers high-quality support, 24/7 customer service, and advanced automated features. Once you have connected all your sales channels and payment platforms, Synder will provide automatic bookkeeping. This ensures accurate and error-free synchronization, categorization, live data reconciliation, and transaction data synchronization. Synder keeps accurate records of all your payment data, without duplications. The detailed and 100% accurate Profit and Loss Reports provide additional information that can be used to analyze your business' cash flow or budget planning. The software runs smoothly and is fully automated. You don't even need to log in. Synder allows you to apply sales taxes, taxes based upon location, shipping address, product names, etc. Customers are reminded of regular payments by recurring invoices. Synder offers a free trial to see the software in action.
  • 13
    FreshBooks Reviews
    Top Pick
    FreshBooks makes billing and invoicing for small businesses easy. Freshbooks is a top-rated accounting and invoice software for self-employed professionals as well as small businesses. It makes it easy to invoicing and billing so that companies can concentrate on the work they love. It has a wide range of powerful features, including expense tracking, time tracking and payment processing. The Freshworks mobile app allows users to work from anywhere using Freshbooks.
  • 14
    HoneyBook Reviews
    Top Pick

    HoneyBook

    HoneyBook

    $19 monthly ($16 annually)
    16 Ratings
    HoneyBook makes it easy for independent business owners to communicate with customers and clients, manage projects, and get paid—all in one place. With the help from our business management software, you can automate your busy work and stay on top of all your to-dos, saving time and money so you can grow your business. Its like your own personal assistant. With their proposals, invoices, contracts, payments, and scheduling at your fingertips, HoneyBook gives you everything you need to give clients an unforgettable experience.
  • 15
    QuickBooks Online Reviews
    Top Pick

    QuickBooks Online

    Intuit

    $9/month (normally $15/month)
    45 Ratings
    QuickBooks Online is the most widely used accounting software in the entire world. QuickBooks Online simplifies accounting. Accounting software for small businesses that is #1 makes it easy to track receipts, income, transactions and more. You can take photos of receipts to link them with expenses. Our agents are available to answer any questions you may have about QuickBooks. Keep your business running smoothly by using the apps that you love. QuickBooks Online is compatible with PCs, Macs, tablets and phones. Click the link to get a 30-day free trial, and 50% off for your first three months. QuickBooks is more than just accounting software. QuickBooks helps you keep track of your income and expenses so that you can prepare for taxes. Customers save an average of $3,534 per year. Need more help? QuickBooks Live helps you to stay organized and ready for tax season. QuickBooks Mobile is a mobile application that helps you run your business anywhere, anytime.
  • 16
    Keap Reviews
    Top Pick
    Learn how Keap can help you organize, automate daily tasks, and close more leads. Keap, previously known as Infusionsoft is the all-in one CRM for small businesses. Small businesses can do great work in a smarter way. Keap helps you organize your client information and daily work in one place. This will free you from repetitive tasks. All your leads, both new and old, are in one place. Access to all of your client information 24/7, anywhere. With easy scheduling and quoting, you can take the hassle out of winning work. Track outstanding invoices and get paid faster. Refer friends and build long-lasting relationships.
  • 17
    Maxio Reviews
    Maxio empowers B2B SaaS leaders in monetizing their businesses and uncovering critical financial insights in a volatile market. Natural growth is not a straight line. It ebbs-and-flows with the market. Maxio can help you navigate your business through any inflection point, no matter where you are on your growth path. Maxio is a system that supports your monetization model, no matter how complex or simple, without compromising the agility necessary to meet changing market needs. Maxio is able to strike the right balance. Maxio will not let your systems stop you from going to market. Maxio is the core of your tech stack. Maxio automates the manual tasks between your CRM, GL and reporting tools. You need to have insights now, not two weeks later, in order to navigate a constantly changing market. Maxio allows you to quickly and accurately answer your most difficult business questions.
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    Teamleader Reviews

    Teamleader

    Teamleader

    $25.00/month/user
    As an entrepreneur, you have a lot on your plate when it comes to running your business. That's where Teamleader comes in to make your life easier and your mind free. Our business software allows you to create quotes, manage customer relationships, invoice, and plan work, all in one convenient place. This means you can avoid the hassle of having information scattered across different inboxes, Excel sheets, and software. Instead, you'll have a clear overview of your sales opportunities, projects, and payments, giving you a sharp picture of your business's performance. Join over 15,000 entrepreneurs and their teams who rely on Teamleader's business software to streamline their paperwork and get more done with less hassle. Sounds good?
  • 19
    Plus & Minus Reviews

    Plus & Minus

    Plus & Minus Software

    $1000.00/one-time/user
    Plus & Minus, an integrated enterprise resource planning (ERP), financial platform, is built around a single file system. Plus & Minus offers collaborative tools for accounting and purchasing, managing sales, reporting operations, and other functions. Plus & Minus allows users to track sales, manage core finance operations, create custom business reports, and monitor documents. Plus & Minus allows users to deploy on-premises or in the cloud.
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    KashFlow Reviews

    KashFlow

    KashFlow Software

    $7.00/month/user
    KashFlow, a cloud-based, award-winning accounting software, will keep your accounts in control. KashFlow is a cloud-based accounting software that is easy to use and jargon-free. It was created for sole traders and growing companies. KashFlow's accounting software makes it easy to do everything, from invoicing and quoting, to payroll and reporting.
  • 21
    Subscription DNA Reviews

    Subscription DNA

    Subscription DNA, LLC.

    $199 per month
    Subscription DNA®, Automate Your Recurring Payment Business Subscription Billing, Membership and Paywall Software Subscription DNA's powerful SaaS platform integrates automated subscription billing, robust subscription management and reporting, paywall implementation, user authentication and customer self-serve account management. We provide hands-on service to help setup your entire working model and show you how to use it. Your customers can log in from your website directly to manage their accounts using our custom front-end options. Our branded administrative console allows you to quickly manage accounts, automate repetitive invoicing, analyze reports and communicate with targeted user groups. You can also process transactions, generate payments requests, track member login statistics, and much more. You can benefit from our flexible and personal approach to ongoing support and custom development services at your own terms. We work with clients on a first name basis with long term relationships.
  • 22
    billwerk Reviews

    billwerk

    billwerk

    euro 139/month
    Your European subscription business will benefit from radically automated Subscription Management, Recurring billing and Payments. The platform is compliant with European Standards EU–DSGVO, GOBD, and has a strong REST API. It also offers a variety ready-to-use integrations for European third-party sellers. Billwerk helps you increase your subscription revenues faster, reduce your costs, and enjoy the high rate of product innovation on the platform.
  • 23
    MONEI Reviews

    MONEI

    Microapps sl

    $0
    MONEI makes it easy to do everything MONEI allows you to accept online and offline payments. MONEI can be integrated directly to your website or online shop with just one line of code (or none at all). MONEI protects against fraud, issues refunds, and helps you succeed in your business. This is the simplest and most cost-effective way to make money from your website. Move money with ease Transparently and securely transfer your money online -- there is no paperwork or compliance required when accepting payments to open a business. MONEI integration will increase your conversion rates. Our capabilities and features are unbeatable. It's insanely simple MONEI was designed so that anyone can use it. Tomorrow you will be your six-year-old child, on their journey to conquering the business world. It takes a few clicks to get it done.
  • 24
    paysley Reviews

    paysley

    paysley

    $15 per month
    Paysley allows customers to send secure payments to you via text messaging, picture messaging and email. Customers can also access any custom payment page from their mobile devices by scanning a QR code that can be displayed anywhere. To make a payment, your customers don't need to download an application or register. Paysley is the easiest and most convenient way to make payments. No special devices or card readers are required. Cardholders can make payments using their mobile devices. There is no customer app download, account registration, password, or login. No redirect to a service provider's website. Paysley is a direct tokenized payment option. You don't need to ask for customer's card information ever again. Paysley is secure, and your business will be PCI compliant. Your Paysley Portal allows you to upload and manage customer information. Your customer database doesn't just contain contact information.
  • 25
    Dinero Reviews

    Dinero

    Visma Dinero

    $245 per month
    Start with Dinero now for free - your first invoice can be sent in under two minutes. Dinero is for those who prefer to spend their time on core products rather than on accounting. We make accounting easier. All your accounts, including income, expenses, profits, future payments, VAT due, and all other related information - are stored and presented in Dinero. When you're not at your desk, keep track of company finances and open accounts. You can take a photo of your purchase voucher and upload it safely to the Dinero cloud. It's that easy. No more awkward, curly appendages to lose or fly away in the wind. You can easily and quickly get money at the check-out. Customers can pay you with Visa, Mastercard and Maestro payment cards or MobilePay.
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