Swiss-PdbViewer Description
Swiss-PdbViewer, also known as DeepView, is an application that allows you to analyze multiple proteins simultaneously. To compare active sites and other parts, the proteins can be superimposed. The intuitive interface and graphic make it easy to find information about amino acid mutations, Hbonds, angles and distances between atoms. Nicolas Guex has been developing Swiss-PdbViewer (aka DeepView), since 1994. Swiss-PdbViewer was originally tightly connected to SWISS-MODEL (an automated homology modeling server) that was developed at the Structural Bioinformatics Group of the Biozentrum in Basel. The SWISS-MODEL interface has evolved to the point that advanced modeling can now be done directly. It is no longer possible to maintain a direct interface with SwissPdbViewer.
Swiss-PdbViewer Alternatives
HyperProtein
HyperProtein, Hypercube, Inc.'s latest product, focuses on the computational science of protein sequences. The product allows you to analyze one-dimensional sequences of protein as well as subsequent three-dimensional structures. The product's most important feature is the relationship between structure and sequence. HyperProtein is not like other software programs that can perform specific functions, such as sequence alignment or protein sequence sequence, but it does combine a variety of Bioinformatics tools and Molecular Modeling tools that are related to the science that begins with a protein sequence.
Learn more
Avogadro
Avogadro, an advanced molecule editor/visualizer, is designed for cross-platform usage in computational chemistry and molecular modeling. It provides high-quality rendering and a powerful plugin structure. Avogadro, a free and open-source molecular editor/visualization tool, is available for Mac, Windows, and Linux. It can be used in computational chemistry and molecular modeling as well as materials science and other related areas. It provides flexible, high-quality rendering and a powerful plugin structure.
Learn more
Ascalaph Designer
Ascalaph Designer is a general purpose program for molecular dynamics simulations. All the molecular dynamics methods can be implemented in a single graphical environment. Molecular geometry optimization using conjugate gradient methods. Displays molecular models in separate window. Two cameras are installed in each window. This allows the model to be viewed simultaneously from both sides and in different graphic modes. Drag the splitter located in the right corner to open the subwindow. Clicking on an atom/bond with the left mouse button changes their color. A brief description of the object is displayed in the status bar. Large molecules, especially proteins, can be drawn in wireframes. This style allows for fast drawing. CPK wire frame combines all the above properties.
Learn more
BIOVIA Discovery Studio
The biopharmaceutical market is complex today. There are growing demands for better specificity and safety, new treatment classes, and more complex mechanisms of disease. To keep up with this complexity, we need to have a better understanding of therapeutic behavior. Simulation and modeling provide unique opportunities to explore biological and physical processes down to the atomic levels. This can be used to guide physical experimentation and accelerate the discovery and development process. BIOVIA Discovery Studio brings together more than 30 years of peer reviewed research and world-class in-silico techniques like molecular mechanics and free energy calculations. It also allows for biotherapeutics developmentability and other related topics into one environment. It gives researchers a complete toolkit to explore the nuances in protein chemistry and to catalyze the discovery of small and big molecule therapeutics, from Target ID to Lead Optimizement.
Learn more
Integrations
No Integrations at this time
Company Details
Company:
Swiss-PdbViewer
Year Founded:
1994
Headquarters:
Switzerland
Website:
spdbv.unil.ch/
Media
Recommended Products
User Testing Platform | Testeum
Tired of bugs and poor UX going unnoticed despite thorough internal testing? Testeum is the SaaS crowdtesting platform that connects mobile and web app creators with carefully selected testers based on your criteria.
Product Details
Platforms
Windows
Mac
Linux
Type of Training
Documentation
Customer Support
Online
Swiss-PdbViewer Features and Options
Swiss-PdbViewer User Reviews
Write a Review- Previous
- Next