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Description

Cufflinks is a software tool that compiles transcripts, estimates their levels of abundance, and evaluates differential expression and regulation in RNA-Seq datasets. By accepting aligned RNA-Seq reads, it organizes these alignments into a streamlined representation of transcripts. The software then assesses the relative abundances of these transcripts based on the number of supporting reads, while also factoring in potential biases from library preparation methods. Initially created through a collaboration with the Laboratory for Mathematical and Computational Biology, Cufflinks aims to simplify the installation process by offering several binary packages that alleviate the often cumbersome task of building the software from source, which necessitates the installation of various libraries. This toolset encompasses multiple utilities tailored for analyzing RNA-Seq experiments, with some functionalities available independently and others designed to fit into a more comprehensive workflow. Overall, Cufflinks serves as a vital resource for researchers in the field of genomics, enhancing their ability to interpret RNA-Seq data effectively.

Description

Enhance the understanding of 3D reconstruction capabilities from images and photogrammetry by creating a C++ framework. Facilitate reproducible research through an easily comprehensible and precise implementation of both contemporary and traditional algorithms. OpenMVG is crafted to be user-friendly, allowing for straightforward reading, learning, modification, and application. With its rigorous test-driven development and comprehensive samples, the library empowers users to construct reliable larger systems. OpenMVG encompasses a complete framework for 3D reconstruction from images, comprising various libraries, executables, and processing pipelines. The libraries grant seamless access to functionalities such as image manipulation, feature description and matching, camera models, feature tracking, robust estimation, and multiple-view geometry. The executables address specific tasks required by a pipeline, including scene initialization, feature detection, matching, and the reconstruction process known as structure-from-motion. Furthermore, this versatility makes OpenMVG a valuable tool for both beginners and seasoned researchers in the field.

API Access

Has API

API Access

Has API

Screenshots View All

Screenshots View All

Integrations

No details available.

Integrations

No details available.

Pricing Details

Free
Free Trial
Free Version

Pricing Details

No price information available.
Free Trial
Free Version

Deployment

Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook

Deployment

Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook

Customer Support

Business Hours
Live Rep (24/7)
Online Support

Customer Support

Business Hours
Live Rep (24/7)
Online Support

Types of Training

Training Docs
Webinars
Live Training (Online)
In Person

Types of Training

Training Docs
Webinars
Live Training (Online)
In Person

Vendor Details

Company Name

Cole Trapnell

Founded

2017

Country

United States

Website

cole-trapnell-lab.github.io/cufflinks/

Vendor Details

Company Name

openMVG

Website

github.com/openMVG/openMVG

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