D-Wave Systems is quite suspect and doesn't have much respect in the scientific community. On the other hand, Quantum Computing (QC) does rest on sound scientific principles, and in the quest for it we learn a lot. The gain if we succeed would be enormous. It is easy to get the impression that quantum computing only can be used for factorizing numbers, but the big gain would rather be in other fields of science, such as medicine and biology where we would use QC to simulate e.g. proteins.
The link you provided questions quantum physics in general. Quantum physics is extremely well tested theory that is the foundation for all modern science och technology. It's not that no one has tried, but it has proved very difficult to provide a competing theory that explains even a small part of the known phenomena on the atomic level.