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Description
ESPResSo, which stands for the Extensible Simulation Package for Research on Soft Matter, is a flexible and open-source simulation tool designed for executing and analyzing molecular dynamics and Monte Carlo simulations involving multiple particles. This package serves as a comprehensive resource for modeling a diverse range of soft matter systems, with a particular focus on coarse-grained atomistic or bead-spring models that find applications in fields such as physics, chemistry, molecular biology, and engineering processes. Users can leverage ESPResSo to simulate various phenomena, including polymers, liquid crystals, colloids, polyelectrolytes, ferrofluids, gels, biological systems, DNA structures, lipid membranes, bacterial movements, and even super-capacitors. By employing coarse-grained models, where clusters of atoms or molecules are simplified into single beads, researchers can explore significantly larger time and length scales that would be unfeasible with purely atomistic approaches. Furthermore, ESPResSo enables the execution of classical molecular dynamics simulations across multiple statistical ensembles, enhancing its versatility in scientific research. This capability allows scientists to tackle complex problems in soft matter physics more efficiently and effectively.
Description
Tellurium is a versatile Python package that integrates several key tools necessary for conducting simulation studies in systems biology and various other fields. It offers access to the robust high-performance simulation engine known as libRoadrunner. Users can create their models using Antimony, a simplified, human-readable format based on SBML. Additionally, an Antimony tutorial is available for those looking to learn the specifics of the language. Tellurium is compatible with all major standards, including SBML, SED-ML, and COMBINE archives. It can be utilized through user-friendly GUI environments like Spyder, PyCharm, or Jupyter Notebooks, including CoLab, which enhances productivity and supports interactive editing features. Installation is straightforward, achieved through the standard pip method, and there is also a convenient one-click installer available for Windows users that sets up a comprehensive environment for systems biology modeling. The development of Tellurium benefits from the contributions of a wide range of open-source developers, ensuring a continually evolving tool for researchers. Overall, Tellurium stands out as an essential resource for those involved in simulation studies across multiple scientific disciplines.
API Access
Has API
API Access
Has API
Integrations
Python
Pricing Details
Free
Free Trial
Free Version
Pricing Details
$15.00/month/user
Free Trial
Free Version
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Vendor Details
Company Name
ESPResSo
Country
United States
Website
espressomd.org/wordpress/
Vendor Details
Company Name
Tellurium
Founded
2010
Country
United States
Website
tellurium.analogmachine.org
Product Features
Product Features
Automated Testing
Hierarchical View
Move & Copy
Parameterized Testing
Requirements-Based Testing
Security Testing
Supports Parallel Execution
Test Script Reviews
Unicode Compliance