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Description

BigOmics Analytics is an innovative startup focused on biodata analytics, creating platforms that empower biologists to effectively visualize and interpret their omics data. Our primary offering, Omics Playground, is a highly intuitive bioinformatics tool tailored for RNA-seq and proteomics, enabling users to store their experimental data and visualize it interactively. With more than 18 interactive analysis modules and over 150 dynamic plots, the platform supports co-analysis with a vast array of more than 6,000 public datasets, in addition to providing access to more than 50,000 public gene sets and pathways. Furthermore, it seamlessly incorporates drug connectivity and drug sensitivity databases, featuring an extensive collection of over 30,000 drug expression profiles. BigOmics Analytics is designed to promote collaboration between biologists and bioinformaticians, allowing users to uncover insights while minimizing the time spent on data analysis, all without the need for any programming knowledge. The platform's commitment to producing reliable and reproducible results is achieved through the implementation of state-of-the-art methodologies. Ultimately, BigOmics Analytics is revolutionizing the way biological data is analyzed and understood.

Description

Cufflinks is a software tool that compiles transcripts, estimates their levels of abundance, and evaluates differential expression and regulation in RNA-Seq datasets. By accepting aligned RNA-Seq reads, it organizes these alignments into a streamlined representation of transcripts. The software then assesses the relative abundances of these transcripts based on the number of supporting reads, while also factoring in potential biases from library preparation methods. Initially created through a collaboration with the Laboratory for Mathematical and Computational Biology, Cufflinks aims to simplify the installation process by offering several binary packages that alleviate the often cumbersome task of building the software from source, which necessitates the installation of various libraries. This toolset encompasses multiple utilities tailored for analyzing RNA-Seq experiments, with some functionalities available independently and others designed to fit into a more comprehensive workflow. Overall, Cufflinks serves as a vital resource for researchers in the field of genomics, enhancing their ability to interpret RNA-Seq data effectively.

API Access

Has API

API Access

Has API

Screenshots View All

Screenshots View All

Integrations

No details available.

Integrations

No details available.

Pricing Details

No price information available.
Free Trial
Free Version

Pricing Details

Free
Free Trial
Free Version

Deployment

Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook

Deployment

Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook

Customer Support

Business Hours
Live Rep (24/7)
Online Support

Customer Support

Business Hours
Live Rep (24/7)
Online Support

Types of Training

Training Docs
Webinars
Live Training (Online)
In Person

Types of Training

Training Docs
Webinars
Live Training (Online)
In Person

Vendor Details

Company Name

BigOmics Analytics

Founded

2018

Country

Switzerland

Website

bigomics.ch/

Vendor Details

Company Name

Cole Trapnell

Founded

2017

Country

United States

Website

cole-trapnell-lab.github.io/cufflinks/

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