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Description
Ascalaph Designer is a versatile software designed for conducting molecular dynamic simulations. It integrates various implementations of molecular dynamics alongside classical and quantum mechanics methodologies from widely-used programs within a unified graphical interface. The software includes molecular geometry optimization utilizing conjugate gradient techniques. Molecular models are displayed in distinct windows, each equipped with dual camera views that enable simultaneous visualization from multiple angles and in various graphic representations. Users can easily open additional subwindows by adjusting the splitter located in the corner of each graphical display. By clicking an atom or bond with the left mouse button, users can slightly alter its color, and relevant information about the selected object is presented in the status bar. The wire-frame visualization style proves especially effective for large molecules, such as proteins, ensuring rapid rendering. Additionally, the CPK wire frame style effectively merges characteristics from several other visualization options, enhancing user experience. This program not only facilitates complex simulations but also significantly improves the analysis of molecular structures through its innovative display features.
Description
Biohub serves as an accessible platform dedicated to advancing the understanding of protein biology. It offers users the ESM model family, which includes ESMC, ESMFold2, and ESM3, alongside interactive tools and resources tailored for developers involved in protein science research. ESMC stands out as a cutting-edge protein language model, meticulously trained on vast amounts of evolutionary sequence data, allowing it to create representations that elucidate key mechanisms underlying protein structure and function. This model facilitates various applications such as functional analysis, predicting structures, designing proteins, and investigating the evolutionary connections among different proteins. Meanwhile, ESMFold2 specializes in predicting high-resolution, all-atom 3D structures of biomolecular complexes from sequences, while offering the option of including multiple sequence alignments to improve accuracy for difficult targets. Additionally, ESM3 takes a holistic approach by simultaneously modeling sequence, structure, and function, thus enabling the generation of innovative proteins through conditioning on a blend of these aspects. This unique integration of tools and models empowers researchers to explore new frontiers in protein science.
API Access
Has API
API Access
Has API
Integrations
ESMC
ESMFold2
Pricing Details
Free
Free Trial
Free Version
Pricing Details
No price information available.
Free Trial
Free Version
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Vendor Details
Company Name
Agile Molecule
Country
Sweden
Website
www.biomolecular-modeling.com/Ascalaph/Ascalaph_Designer.html
Vendor Details
Company Name
Biohub
Founded
2016
Country
United States
Website
biohub.ai/
