This *could* actually be good if they treat it like the first Pirates of the Caribbean movie. That movie simply made a Good Pirate film, not really tying it to the ride at all (that being said I recently went to Disney World and it's interesting that they've retcon'd the ride into being all about the Depp films).
I can easily see them making an Indiana Jones-type sci-fi film where there is one small scene involving an alien puzzle that sort-of resembles a Tetris puzzle. The protagonist lines up some block line in Tetris, a door opens and the movie continues. 30 seconds of reference to the game while otherwise being an independent sci-fi film.
Also, that's why I had high hopes for Battleship. It had a competent director and all he had to do was use a decent Navy/boat script - that's all. They weren't confined to any sort of plot at all. Too bad they messed it up (and, to be fair, I have to admit that the climactic scene with the anchor/flipping the boat around was pretty neat).