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Comment Frontera! (Score 5, Interesting) 124

I am an early use on Frontera, finishing up on Blue Waters. Frontera replaces Blue Waters as the National Science Foundation "leadership class" machine that requires external funding/code that has proven to scale well and is only accessible via the proposal process. Blue Waters (NCSA/U of Illinois) was a fine machine, and I raise my glass to 'er. I had a major research breakthrough on that machine that changed my academic career for the better.

But the new shiny machine in town is quite nice. Frontera has 56 cores per node, whereas Blue Waters had 16 (well, 32, but really 16). I can blast through simulations on 256 Frontera nodes taking half as long as 625 Blue Waters nodes. And I thought Blue Waters was fast when I started using it! There are some growing pains on the machine (mostly with Lustre and people blasting too many files to the FS at once) but overall I'm pretty psyched about how research will go on Frontera.

Further, Frontera isn't even fully assembled yet. A large chunk of the machine will be GPUs that aren't yet active. Currently it's just the CPU side that is working. Our research team is going to use GPUs to do post-processing rather than deep learning / simulation and have code that is ready to go.

Anyhoo yay Linux and yay supercomputers. Oh, I simulate supercell thunderstorms and tornadoes, if you were wondering! http://orf.media/

Comment Re:Everything is information (Score 2) 56

I was going to reply with similar snark on "neuroeconomist" but in looking it up I would have to say neuroeconomics is actually a pretty valid field of study, as it's about how humans make decisions and follow through on those decisions. Since humans regularly make ass-chappingly bad decisions, I will give this guy a pass.

Comment They will change to survive (Score 1) 140

I publish in the field of atmospheric science. The American Meteorological Society journals are the "gold standard" amongst my research peers. While I am not happy with how much it costs to publish and subscribe to the AMS journals (the former is covered by NSF grants, the latter is "subsidized" by the university), all I know as a scientist is (a) I have to publish there to get maximum impact (b) I have to read everything in there to keep up and because the authors will likely be reviewing my future manuscript submissions. If, tomorrow, the AMS journals drastically changed their subscription model - making it open access, dropping the cost to subscribe and/or publish, etc., it would not make a single bit of difference to me, and to probably most other scientists publishing in AMS journals. Everyone would continue to submit and review, because that's where you publish, and if you don't publish there, the "right" people might not read your work.

A major change in the business model for journals would radically affect the journals themselves, and in atmospheric science in the US, the AMS itself which produces the journals. I don't think many of us weather-heads want to see the AMS fail because it does a ton of great stuff (advocacy, education, conferences, etc.), like similar organizations in other fields. But, without us scientists doing peer review for free, all "refereed" journals cease to exist, but so long as you have scientists willing to do the peer review, journals can certainly exist without much staff (many of whom are publishing scientists themselves). So we collectively wield a lot of power should we choose to use it but I personally don't know any other scientists who are willing to die on that particular hill, we're all mostly busy doing our science and trying to scrape some funding together in an extremely competitive environment.

I suspect governments themselves (as was mentioned upthread with the EU) will have to catalyze the real change. Currently AMS journal articles are open to the public after 1 year, with select articles available right away. If NSF decided tomorrow that it was not allowable to ask for more than [dollaramount] of page charges per article in NSF budgets, it would have a real, immediate impact on the problem addressed in the article.

Anyhow put me down as another academic type who definitely agrees that things should change, but also as someone who is not going to spend any time advocating for it simply because it's too big of an issue and I have grants and papers to write (sorry, just being honest here). Switching to a new (read: inferior) set of journals is not a viable option, and that is where the journals wield their real power - we need them (because all the important people read Important X Journal), and they need us to maintain their quality via the peer review process. It's probably going to take an outside force to break the current model; it's hard enough to get funded/tenured/promoted as it is, much less without deliberately publishing in the "wrong" journals.

Comment Re:Blue Waters is dead! Long live... Frontera (Score 1) 88

Thanks for that - I am somewhat pleasantly surprised. I think the general scientific community that uses these things will be by and large happier - they seem to ramping up the clock speed on the CPUs (good ol' Moore) to get a bunch of their performance, and stuffing more cores on a node, etc... performance that will show itself w/out rewriting code. The accelerators will be there and I will be focusing on figuring out ways to exploit them in our fluid code. I suspect this will really be the last NSF machine that won't require significant rewrites, unless [snicker] the compiler writers [haha] find a way to have it just work [Bwahahahahahaha.... I want a pony]...

Comment Blue Waters is dead! Long live... Frontera (Score 4, Interesting) 88

I'm an atmospheric scientist who has been using federal supercomputing hardware to better understand thunderstorms [orf.media] for years. Blue Waters is the current "Leadership Class" NSF-sponsored supercomputer. My Blue Waters allocation is currently winding down, and I can speak to how great it has been as a machine that has enabled (I know it's a cliche, but it's true) breakthrough science. A typical Blue Waters node contains 16 floating point AMD cores and 64 GB of memory. Many of the Blue Waters nodes contain a GPU, but it's miles behind the times since the machine was created about 7 years ago.

Frontera (for some reason the Canyonera theme song plays in my head) is the Phase 1 machine for the next Leadership Class supercomputer. The Phase 1 machine is supposed to come on line in 2019 and hold us over until 2024 when the next machine will come on line. When you look at how much money is being spent on Fronterra, and you compare it to Blue Waters, you realize that the vendor is being asked to create a much more powerful machine for a fraction of the price. What this will mean in practice, and what most of the scientific computing world is not ready for, is that a large bulk of the FLOPS on this new machine will be GPU flops. GPUs are not easy to use for doing heavy lifting (say, fluid dynamics solvers) using existing code. So a lot of people are going to have to decide whether to try to shoehorn their current MPI only (or MPI + some OpenMP) code to MPI, OpenMP + OpenACL (or nvidia CUDA), or to start from scratch (nobody wants to start from scratch). You have to remember that the vast majority of us scientists are NOT trained computer scientists, and most of us code for shit. I am off to a hackathon at NCSA in a couple weeks with some students to optimize some radiation code for GPUS... I spend half of my time doing computer stuff, and the other half doing science (and the other other half writing proposals, etc.).

So for those of you who aren't excited about new supercomputers, or don't understand their true power, I'm here to say that it's currently a very exciting time to be a numerical modeler, if you're willing to learn a bit on how to best wrestle these supercomputers into submission. I've spend over a decade just figuring out the most efficient way to write, organize, and analyze the TB-PB of data that a high resolution model can produce, and trying to make sense out of the firehose of data that these things can make. The hard-won benefits are crystal clear to me, but as always, tech is a moving target, so what works today might not work tomorrow...

The nice thing about supercomputers is they serve as a virtual lab for just about any field you can imagine. There are people in the humanities using supercomputers to do interesting things, beyond all the usual astrophysics, chemistry, and geophysical modeling.

Yay supercomputers, and yay NSF.

Submission + - Dropbox is dropping Linux after 11 years (dropboxforum.com)

rokahasch writes: Starting today, 10th of August, most users of the Dropbox desktop app on Linux have been receiving notifications that their Dropbox will stop syncing starting November.

Over at the Dropbox forums, Dropbox have declared that the only Linux filesystem supported for storage of the Dropbox sync folder starting the 7th of November, will be on a clean EXT4 fs.

This basically means Dropbox drops Linux support completely, as almost all Linux distributions have other file systems as their standard installation defaults nowadays — not to mention encryption running on top of even an EXT4 file system which won't qualify as a clean EXT4 fs for Dropbox (such as ecryptfs which is the default in for example Ubuntu for encrypted home folders).

The thread is trending heavily on Dropbox' forums with the forum's most views since the thread started earlier today. The cries from a large amount of Linux users have so far remained unanswered from Dropbox, with most users finding the explanation given for this change unconvincing. The explanation given so far is that Dropbox requires a fs with support for Extended attributes/Xattrs. Extended attributes however are supported by all major Linux/Posix complaint file systems.

Dropbox have up until today supported Linux platforms since their services began back in 2007.

Comment two-edged sword (Score 2) 47

I'm a long-time audiophile (it's kind of a disease; a fun one, if you can afford it). Never in a million years did I think I'd pay for a streaming service. My main objections are lossy encoding (MP3 or similar) and not having any product whatsoever, digital or otherwise (CD, vinyl). But now that services are coming along that offer CD quality (PCM, 44.1 kHz/16 bit - or perhaps higher) I finally broke down and subscribed to one of them (Tidal). What I like the most is being able to browse the catalog and play new stuff, remotely piloting a Squeezebox Touch that feeds a DAC that feeds "the good stereo". Twenty bucks a month for an unlimited CD quality catalog is a pretty good bargain if you are a voracious music consumer.

At the same time, I continue to buy a little new and used vinyl here and there, but mostly for the fun of it, as I'm just old enough to remember when records were the main media for music. So if you are a format fetishist, you can buy records and CDs will be out there for a long time (and used CDs are cheaper than dirt).

I do wonder how the artists will fare with streaming. I suspect poorly, as always, and that the people who will make the money will be the labels and the streaming services. I hope I'm wrong.

Comment two things (Score 1) 69

1. Two factor authentication, ALWAYS
2. People should stop using email for anything sensitive that you don't want read by your worst enemy. Use some P2P encrypted chat program or something. One would think Americans, at least, could see the value in something other than damned emails for sensitive communication.

Comment Re:Will climate activists argue... (Score 2) 90

Bullshit. Did you even look at the article?

http://www1.ncdc.noaa.gov/pub/...

Show me your trend. Please.

If you are looking at the high end tornado figure, there appears to be a weak downward trend over several decades, but 2011 just rang and asked if El Reno, Joplin and Tuscaloosa wanted to come out and play.

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