Average Ratings 0 Ratings
Average Ratings 0 Ratings
Description
MercuryDPM is an open-source software designed for conducting discrete particle simulations, enabling the analysis of particle or atom movement through the application of forces and torques from external influences, such as gravitational and magnetic fields, as well as from laws governing particle interactions. In the context of granular particles, these interactions predominantly consist of contact forces, which can include elastic, plastic, viscous, and frictional effects, while molecular simulations may utilize interaction potentials like Lennard-Jones. This software is developed in a robust, object-oriented C++ framework, emphasizing clarity, flexibility, and extensibility to accommodate the needs of researchers and engineers tasked with developing new simulation models. Although primarily focused on granular material applications, MercuryDPM is designed to be versatile enough to handle various particle-based systems and accommodate long-range interaction scenarios. Users are supported by comprehensive documentation that walks them through the processes of installation, executing simulations, visualizing results, analyzing data, and creating custom MercuryDPM codes tailored to simulate their specific systems of interest. Overall, MercuryDPM represents a valuable tool for advancing the understanding of particle dynamics across a range of scientific fields.
Description
NAMD is a high-performance parallel molecular dynamics software specifically developed for the simulation of extensive biomolecular systems. Utilizing Charm++ parallel objects, it effectively scales from personal computing devices to advanced parallel systems, accommodating hundreds of cores for standard simulations and exceeding 500,000 cores for the most demanding cases. This software is tailored for researchers aiming to perform efficient simulations of large molecular systems while ensuring integration with commonly utilized molecular modeling workflows. It collaborates with the well-known molecular graphics tool VMD for both simulation setup and trajectory analysis, maintaining compatibility with file formats from AMBER, CHARMM, and X-PLOR. Furthermore, it is engineered to facilitate biomolecular simulations that encompass proteins, membranes, nucleic acids, solvents, ions, and other molecular systems, allowing for an in-depth exploration of atomic interactions and time-dependent movements. Researchers can therefore rely on NAMD to provide comprehensive insights into complex molecular dynamics.
API Access
Has API
API Access
Has API
Integrations
C++
Pricing Details
Free
Free Trial
Free Version
Pricing Details
Free
Free Trial
Free Version
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Vendor Details
Company Name
MercuryDPM
Founded
2009
Country
United States
Website
www.mercurydpm.org
Vendor Details
Company Name
Theoretical and Computational Biophysics Group
Founded
2006
Country
United States
Website
www.ks.uiuc.edu/Research//namd/