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Description
Loupe Browser stands out as a robust visualization tool, offering the user-friendly capabilities essential for delving into and interpreting 10x Genomics Chromium and Visium datasets. Additionally, the LoupeR package facilitates the transformation of Seurat objects into files compatible with Loupe Browser. The interactive features of the Loupe Browser interface are exemplified through its use of a lung squamous cell carcinoma dataset. Central to the user experience is the view panel, where individual points, each representing cell barcodes, are displayed across multiple projections. Each point typically corresponds to a single cell’s barcode, enabling focused analysis. The t-SNE plot generated by the cell ranger pipeline serves as the default projection, while alternative visualization options are also accessible. Users can effortlessly reposition the plot by dragging the mouse over the cells and can zoom in or out using the mouse wheel or trackpad. Moreover, as the mouse hovers over the plot, cluster labels become visible, which proves particularly beneficial when working with datasets that contain numerous precomputed clusters. This capability enhances the analytical experience, making it easier to identify and interpret complex data patterns.
Description
Integrate a PDF reader into your Java application or web site.
jPDFViewer, a Java component that is self-contained, can be deployed in a Java app or a Web application (in a Java web page as an applet or a Java webstart program). It is written in Java and can run on Windows, Mac and Linux.
jPDFViewer allows you to load documents from files on a network or local drive, from a URL, and from Java input streams. This is for documents that have been generated runtime, or from other sources such as a database.
Main Features
Any platform that supports Java can read and display PDF files
Print PDF files
Fill interactive PDF forms
All markup annotations available
Digital signatures are validated and displayed
Text search and selection
Advanced tools: zoom and loupe, snap, pan, zoom and zoom
Navigation is easy with multiple views: bookmarks, thumbnails, annotations...
User interface and toolbar customizable
All image types supported
API Access
Has API
API Access
Has API
Screenshots View All
No images available
Integrations
No details available.
Integrations
No details available.
Pricing Details
No price information available.
Free Trial
Free Version
Pricing Details
$2,000
Free Trial
Free Version
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Vendor Details
Company Name
10x Genomics
Founded
2012
Country
United States
Website
www.10xgenomics.com/support/software/loupe-browser/latest
Vendor Details
Company Name
Qoppa Software
Country
United States
Website
qoppa.com