The report in the linked article from networkworld is not accurate. Quote from the article "The stink stems from HSPD #12 which is in part aimed at gathering information to develop a common identification standard that ensures that people are who they say they are, so government facilities and sensitive information stored in networks remains protected."
A close friend is one of the Caltech (technically, he is a contractor at JPL) employees who sued the Federal government. Caltech manages the JPL labs for the federal government. After 9/11, the Bush administration passed this directive to subject federal employees and contractors, working on sensitive and non-sensitive matters to the same invasive background checks. These background checks do not have a set standard or criteria for evaluation, are not disclosed and can affect your employment (read termination). This means that if someone who knows you, when interviewed, says he/she thinks you did pot, that's it, you can be terminated.
To subject federal employees and contractors who are working on confidential/sensitive projects is one thing although still not fair but it is completely unfair to subject employees or contractors working on non-sensitive projects to such arbitrary background checks.
As they say, devil lies in the details. The presidential directive itself does not require background checks. What is requires is that all employees and contracts, irrespective of the nature of work, have to be issued a standard identification card for entering federal facilities. Sounds fair, right? The rub is that to be issued this card, you must pass the background check. So by mandating a standard identification card, the government has mandated all employees and contractors be subjected to background checks. And this is what this group of 30 or so JPL/Caltech scientists are protesting.
On top of all this, these background checks are labour intensive because they require federal agents to interview people who know you and collect personal information about you. Another friend who worked for PG&E waited 3 months to enter the facility he was supposed to work at because the feds could not finish his background check soon enough. Imagine if thousands of other employees or contractors are subjected to this new directive? The quality of these checks is directly proportional to the number of federal agents who do this work and we all know that the number of experienced federal agents is not going to quadruple overnight. So the end result is going to be dilution in the quality of these checks which then defeats the intent and purpose of these checks.
Phew!! My longest post on /. but no wonder that the government always screws up!!