PacBio Description
PacBio (Pacific Biosciences) is a premier life science technology company that is designing, developing and manufacturing advanced sequencing solutions to help scientists and clinical researchers resolve genetically complex problems. Our products address solutions across a broad set of research applications including human germline sequencing, plant and animal sciences, infectious disease and microbiology, oncology, and other emerging applications.
The Revio system adds affordability, high throughput, and ease of use to a foundation of long reads, exceptional accuracy, and direct methylation detection.
The Onso system is an innovative benchtop short-read DNA sequencing platform with an extraordinary level of accuracy using PacBio sequencing by binding.
Software tools for Sequel II/IIe and Revio systems designed to set up and monitor long-read HiFi sequencing runs, review performance metrics, analyze, visualize, and annotate sequencing data.
PacBio Alternatives
Genome Analysis Toolkit (GATK)
The toolkit was developed in the Data Sciences Platform of the Broad Institute. It offers a variety of tools, with a focus on variant detection and genotyping. Its powerful processing engine, high-performance computing capabilities and flexibility make it a great tool for any project. The GATK is a standard in the industry for identifying SNPs in RNAseq and germline DNA data. Its scope has now expanded to include somatic short variation calling, copy number (CNV), and structural variation (SV). The GATK includes not only the variant callers, but also many utilities that perform related tasks like processing and quality-control of high-throughput sequence data. It also bundles the Picard toolkit. These tools were designed primarily to process whole genomes and exomes generated by Illumina sequencing technology. However, they can be adapted for a variety other technologies and experimental design.
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Illumina DRAGEN Secondary Analysis
Illumina DRAGEN Secondary Analysis is a comprehensive and accurate analysis of next-generation sequence data. Machine learning and graph reference genome drive unprecedented accuracy. Ultra-efficient workflow. Can process a whole 34x human genome in under 30 minutes using DRAGEN server version 4. Reduces FASTQ files up to 5x, resulting in an ultra-efficient workflow. Analyzes data from next-generation sequencing (NGS), including whole genomes, transcriptomes, methylomes and exomes. Available on the platform of your choice and scalable according to needs. DRAGEN analysis is the most accurate for germline and somatic mutation calling, as demonstrated by precisionFDA's industry challenges. DRAGEN analysis allows labs of any size and discipline to do more with genomic data. DRAGEN analysis is based on highly reconfigurable FPGA technology to provide hardware-accelerated implementations for genomic analysis algorithms.
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Azenta Life Sciences
Azenta Life Sciences provides scalable, flexible, and powerful informatics sample processing systems that allow lab systems to efficiently deploy across all locations and use built-in project management functionality. We offer unrivaled sample exploration, management, and delivery solutions to accelerate discovery, development and delivery. Azenta Life Sciences offers cloud-based informationatics solutions for sample processing. These solutions automate laboratory workflows, and reduce staff workloads through standard processes. Modules can be used to manage patients, families, clinical trials, informed consent, storage and diagnostics, as well as sample processing. Interfaces with external data sources are available and flexible options for integrating 3rd-party systems and instruments.
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Clarity LIMS
Clarity LIMS, a laboratory information system, is designed for genomics laboratories to track samples and manage workflows in order to optimize and efficiently run the lab.
Clarity LIMS is capable of much more than just tracking samples. It is the digital backbone for your lab and actively manages all laboratory operations from sample and data collection to people, instruments and consumables. Clarity LIMS automates and standardizes workflows to save time and reduce the risk of human error. It can be scaled to fit your laboratory ecosystem and accommodate new technologies. Clarity LIMS is a laboratory information management system.
Pre-packaged workflows, Illumina sample/library preparation kits and instruments and quality control features flagging poor-quality samples help your laboratory save time.
Supports compliance with eSignatures, audit trails, reagent tracking and lot tracking and privacy and security controls
Automated business logic and error checking promote accuracy
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Integrations
API:
Yes, PacBio has an API
No Integrations at this time
Company Details
Company:
Pacific Biosciences (PacBio)
Year Founded:
2004
Headquarters:
United States
Website:
www.pacb.com/products-and-services/
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Product Details
Platforms
SaaS
Type of Training
Documentation
Webinars
Customer Support
Phone Support
Online
PacBio Features and Options
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