Cellenics Description
Transform your single-cell RNA sequencing data into actionable insights using Cellenics software, which is hosted by Biomage as a community instance of this open-source analytics tool developed at Harvard Medical School. This platform empowers biologists to delve into single-cell datasets without the need for coding, while facilitating collaboration between scientists and bioinformaticians. Within just a few hours, it can convert count matrices into publication-ready figures, integrating effortlessly into your existing workflow. Cellenics is designed to be fast, interactive, and user-friendly, as well as being cloud-based, secure, and scalable to meet various research needs. The community instance provided by Biomage is available at no cost for academic researchers working with smaller to medium-sized datasets, accommodating up to 500,000 cells. Currently, over 3000 academic researchers engaged in studies related to cancer, cardiovascular health, and developmental biology are utilizing this powerful tool. This collaborative environment not only enhances research capabilities but also accelerates the discovery process in various scientific fields.
Cellenics Alternatives
OpenClinica
OpenClinica is a leading provider of clinical data management software solutions. OpenClinica provides powerful tools to ensure that clinical trials are compliant and efficient. OpenClinica Enterprise, OpenClinica Participate and OpenClinica Randomize are the core products.
OpenClinica is a powerful clinical trial platform that offers a wide range of tools for data collection, patient engagement, and study management. From electronic data capture (EDC) and eConsent to patient recruitment and real-time reporting, OpenClinica’s solutions automate and simplify the clinical trial process. With features like EHR-to-EDC integration and advanced reporting dashboards, the platform improves data accuracy, reduces delays, and enhances compliance. OpenClinica has been used in over 15,000 clinical studies, providing support for organizations around the globe, including government agencies and pharmaceutical companies, to conduct trials with confidence.
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Samsara
Avoiding HOS violations is made easier with a mobile app that logs drivers' hours, providing real-time insights into those approaching or already in violation, thereby ensuring compliance with the ELD regulations. This comprehensive platform, which is FMCSA certified, offers a unified system for managing Hours of Service, GPS tracking, dispatching, and vehicle maintenance. With an integrated WiFi hotspot, devices remain connected even in areas without cellular service, which is crucial for maintaining operational efficiency. The solution also eliminates compliance mistakes and accelerates repair processes through paperless DVIRs and a live maintenance dashboard. By integrating features such as GPS tracking, Hours of Service management, paperless DVIRs, and temperature monitoring, compliance and operational tasks become streamlined. Additionally, the plug-and-play installation requires no complex setup, allowing users to be operational within just 15 minutes. Samsara’s hardware is compatible with a wide range of vehicles, including cars, light and heavy trucks, and buses, ensuring versatility for various fleet needs. This holistic approach not only enhances compliance but also significantly boosts productivity across the board.
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Loupe Browser
Loupe Browser stands out as a robust visualization tool, offering the user-friendly capabilities essential for delving into and interpreting 10x Genomics Chromium and Visium datasets. Additionally, the LoupeR package facilitates the transformation of Seurat objects into files compatible with Loupe Browser. The interactive features of the Loupe Browser interface are exemplified through its use of a lung squamous cell carcinoma dataset. Central to the user experience is the view panel, where individual points, each representing cell barcodes, are displayed across multiple projections. Each point typically corresponds to a single cell’s barcode, enabling focused analysis. The t-SNE plot generated by the cell ranger pipeline serves as the default projection, while alternative visualization options are also accessible. Users can effortlessly reposition the plot by dragging the mouse over the cells and can zoom in or out using the mouse wheel or trackpad. Moreover, as the mouse hovers over the plot, cluster labels become visible, which proves particularly beneficial when working with datasets that contain numerous precomputed clusters. This capability enhances the analytical experience, making it easier to identify and interpret complex data patterns.
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Bioconductor
The Bioconductor initiative is dedicated to creating and distributing open-source software designed for the accurate and reproducible analysis of biological datasets. We cultivate a welcoming and cooperative environment for developers and data scientists alike. The platform offers a wealth of resources aimed at enhancing the capabilities of Bioconductor. Whether you're looking for fundamental tools or sophisticated functionalities, our extensive tutorials, guides, and documentation ensure you have all the necessary support. Utilizing the R programming language, Bioconductor operates on an open-source and open development model. With biannual releases and a vibrant user community, it remains a vital resource in the field. Additionally, Bioconductor supplies Docker images for each release and offers assistance for its use within AnVIL. Established in 2001, Bioconductor is an essential open-source software resource extensively utilized in bioinformatics and biomedical research. It features over 2,000 R packages contributed by more than 1,000 developers, achieving over 40 million downloads annually. Furthermore, Bioconductor has been referenced in over 60,000 scientific articles, showcasing its significant impact on research and analysis in the biological sciences. This ongoing commitment to open-source collaboration continues to drive innovations in the field.
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Pricing
Pricing Starts At:
Free
Free Version:
Yes
Integrations
No Integrations at this time
Company Details
Company:
Biomage
Headquarters:
United Kingdom
Website:
www.biomage.net
Media
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Product Details
Platforms
Web-Based
Types of Training
Training Docs
Training Videos
Customer Support
Online Support
Cellenics Features and Options
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