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Average Ratings 0 Ratings
Description
Loupe Browser stands out as a robust visualization tool, offering the user-friendly capabilities essential for delving into and interpreting 10x Genomics Chromium and Visium datasets. Additionally, the LoupeR package facilitates the transformation of Seurat objects into files compatible with Loupe Browser. The interactive features of the Loupe Browser interface are exemplified through its use of a lung squamous cell carcinoma dataset. Central to the user experience is the view panel, where individual points, each representing cell barcodes, are displayed across multiple projections. Each point typically corresponds to a single cell’s barcode, enabling focused analysis. The t-SNE plot generated by the cell ranger pipeline serves as the default projection, while alternative visualization options are also accessible. Users can effortlessly reposition the plot by dragging the mouse over the cells and can zoom in or out using the mouse wheel or trackpad. Moreover, as the mouse hovers over the plot, cluster labels become visible, which proves particularly beneficial when working with datasets that contain numerous precomputed clusters. This capability enhances the analytical experience, making it easier to identify and interpret complex data patterns.
Description
NoviSight 3D cell analysis software enhances your research by delivering statistical insights for spheroids and various 3D structures in microplate experiments. This software allows for the quantification of cellular activity in three dimensions, facilitating the capture of infrequent cellular occurrences, providing precise cell counts, and boosting detection sensitivity. Featuring an intuitive user interface, NoviSight equips you with essential tools for recognition, analysis, and statistical evaluation. Its True 3D technology simplifies the assessment of sample morphology, allowing for the measurement of various parameters such as volume and sphericity of spheroids or cell nuclei. Additionally, it enables the examination of physiologically relevant 3D cell models, thereby accelerating your research processes. The software is capable of analyzing objects of interest to yield morphology and spatiotemporal parameters within a 3D context. Furthermore, it can detect a range of entities, from entire structures to subcellular components, and assess changes occurring in spheroids, ultimately contributing to a deeper understanding of cellular dynamics. This comprehensive analysis ultimately supports researchers in their quest to uncover critical biological insights.
API Access
Has API
API Access
Has API
Integrations
No details available.
Integrations
No details available.
Pricing Details
No price information available.
Free Trial
Free Version
Pricing Details
No price information available.
Free Trial
Free Version
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Deployment
Web-Based
On-Premises
iPhone App
iPad App
Android App
Windows
Mac
Linux
Chromebook
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Customer Support
Business Hours
Live Rep (24/7)
Online Support
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Types of Training
Training Docs
Webinars
Live Training (Online)
In Person
Vendor Details
Company Name
10x Genomics
Founded
2012
Country
United States
Website
www.10xgenomics.com/support/software/loupe-browser/latest
Vendor Details
Company Name
Olympus
Country
United States
Website
www.olympus-lifescience.com/en/software/novisight/